Mercurial > repos > yhoogstrate > package_segmentation_fold_1_6_5

changeset 15:f4043c6a367a draft

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planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/segmentation_fold_galaxy_wrapper commit 3814f709ce964e99fe3cf2f979c11f8f3b87bce3-dirty
author yhoogstrate
date Wed, 25 May 2016 05:08:31 -0400
parents d37a11ac2b85
children 6952a20fa81a
files tool_dependencies.xml
diffstat 1 files changed, 2 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Tue May 24 07:41:49 2016 -0400
+++ b/tool_dependencies.xml	Wed May 25 05:08:31 2016 -0400
@@ -90,6 +90,8 @@
                     <repository changeset_revision="25da74c1ff6d" name="package_htseq_0_6" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="htseq" version="0.6.1" />
                     </repository>
+                    
+                    <package sha256sum="cc6a19da8ebff6e7074f731447ef7e112bd23adf3de5c597cf9989f2fd8defe9">https://pypi.python.org/packages/7a/00/c14926d8232b36b08218067bcd5853caefb4737cda3f0a47437151344792/click-6.6.tar.gz</package>
                 </action>
                 
                 <action type="make_directory">$INSTALL_DIR/lib/python</action>
@@ -97,9 +99,6 @@
                 <action type="shell_command">
                     export PYTHONPATH="$PYTHONPATH:$INSTALL_DIR/lib/python:$INSTALL_DIR/lib64/python"  &amp;&amp;
                     cd scripts/energy-estimation-utility                                               &amp;&amp;
-                    echo "---------------------------------------------------------------------------" &amp;&amp;
-                    head -n 161 segmentation_fold_utils/XMLFile.py | tail -n 11                        &amp;&amp;
-                    echo "---------------------------------------------------------------------------" &amp;&amp;
                     python setup.py install --home "$INSTALL_DIR" --install-scripts "$INSTALL_DIR/bin"
                 </action>