Mercurial > repos > yhoogstrate > featurecounts_valid_gff

changeset 24:833116c366f5

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Uploaded
author yhoogstrate
date Thu, 09 Jan 2014 02:57:10 -0500
parents 1a06d89ec1d4
children 7d51c3e8e230
files featureCounts.xml
diffstat 1 files changed, 1 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/featureCounts.xml	Thu Nov 21 06:02:12 2013 -0500
+++ b/featureCounts.xml	Thu Jan 09 02:57:10 2014 -0500
@@ -11,7 +11,7 @@
 		-->
 		featureCounts
 			-a $input_annotation
-			-o tmp.txt
+			-o $output
 			
 			#if $alignments[0].file.extension == "bam"
 				-b
@@ -41,7 +41,6 @@
 			> /dev/null 2> /dev/null
 		
 		
-		
 		#if $format == "complex" or $format.value == "complex"
 			; mv tmp.txt $output
 		#elif $format == "tabdel_default" or $format.value == "tabdel_default"