# HG changeset patch
# User yhoogstrate
# Date 1389254230 18000
# Node ID 833116c366f5fe504807a72c22f538f3f06fc865
# Parent  1a06d89ec1d482fbd54d5f38ede384d5a78a785d
Uploaded

diff -r 1a06d89ec1d4 -r 833116c366f5 featureCounts.xml
--- a/featureCounts.xml	Thu Nov 21 06:02:12 2013 -0500
+++ b/featureCounts.xml	Thu Jan 09 02:57:10 2014 -0500
@@ -11,7 +11,7 @@
 		-->
 		featureCounts
 			-a $input_annotation
-			-o tmp.txt
+			-o $output
 			
 			#if $alignments[0].file.extension == "bam"
 				-b
@@ -41,7 +41,6 @@
 			> /dev/null 2> /dev/null
 		
 		
-		
 		#if $format == "complex" or $format.value == "complex"
 			; mv tmp.txt $output
 		#elif $format == "tabdel_default" or $format.value == "tabdel_default"