Mercurial > repos > yhoogstrate > featurecounts
changeset 13:89d097ed772c draft
planemo upload for repository https://bitbucket.org/EMCbioinf/galaxy-tool-shed-tools/raw/master/featurecounts commit 0eac9a776e7bc33275b8ef5e76a4f17b7b5c1259-dirty
| author | yhoogstrate |
|---|---|
| date | Mon, 01 Jun 2015 07:12:39 -0400 |
| parents | b2c1799ed8d1 |
| children | 0c78776423b6 |
| files | featurecounts.xml |
| diffstat | 1 files changed, 1 insertions(+), 3 deletions(-) [+] |
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--- a/featurecounts.xml Mon Jun 01 07:07:09 2015 -0400 +++ b/featurecounts.xml Mon Jun 01 07:12:39 2015 -0400 @@ -39,7 +39,7 @@ #end if -o "$output" - -T $threads + -T \${GALAXY_SLOTS:-2} #if $extended_parameters.parameters == "extended" -t $extended_parameters.gff_feature_type @@ -148,8 +148,6 @@ <option value="bed">BED format (line per exon): chr "\t" start "\t" stop "\t" description "\t" readcount (tab-delimited)</option> </param> - <param name="threads" type="integer" value="2" min="1" label="Number of the CPU threads. Higher numbers only make sense with a higher number of samples." /> - <conditional name="extended_parameters"> <param name="parameters" type="select" label="featureCounts parameters" help="For more advanced featureCounts settings."> <option value="default">Default settings</option>