Mercurial > repos > yating-l > trfbig

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planemo upload for repository https://github.com/goeckslab/trfBig commit 97fd3895fbafc69df1a1c4092f261ba23fc0bd0b-dirty
author yating-l
date Mon, 01 May 2017 17:22:37 -0400
parents 381dbdd6ca19
children
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9b27da80dcea planemo upload for repository https://github.com/goeckslab/trfBig commit 97fd3895fbafc69df1a1c4092f261ba23fc0bd0b-dirty
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <!-- Package trfBig -->
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4 <package name="trfBig" version="1.0">
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5 <install version="1.0">
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6 <actions>
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7 <action type="download_binary" target_directory="bin">
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8 <url_template os="darwin">http://hgdownload.cse.ucsc.edu/admin/exe/macOSX.${architecture}/trfBig</url_template>
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9 <url_template os="linux">http://hgdownload.cse.ucsc.edu/admin/exe/linux.${architecture}/trfBig</url_template>
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10 </action>
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11 <action type="chmod">
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12 <file mode="750">$INSTALL_DIR/bin/trfBig</file>
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13 </action>
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14 <action type="set_environment">
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15 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
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16 </action>
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17 </actions>
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18 </install>
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19 <readme>The tools downloaded by this dependency definition are free for academic use.</readme>
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20 </package>
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21
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22 <!-- Package trf -->
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23 <!-- https://tandem.bu.edu/trf/downloads/trf407b.linux64 -->
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24 <package name="trf" version="4.07b">
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25 <install version="1.0">
1
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26 <actions_group>
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27 <actions architecture="x86_64" os="linux">
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28 <action type="download_by_url" target_directory="bin">
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29 https://tandem.bu.edu/trf/downloads/trf407b.linux64
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30 </action>
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31 <action type="move_file" rename_to="trf">
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32 <source>trf407b.linux64</source>
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33 <destination>$INSTALL_DIR/bin</destination>
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34 </action>
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35 <action type="chmod">
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36 <file mode="750">$INSTALL_DIR/bin/trf</file>
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37 </action>
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38 <action type="set_environment">
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39 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
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40 </action>
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41 </actions>
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42 <actions architecture="x86_64" os="darwin">
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43 <action type="download_by_url" target_directory="bin">
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44 https://tandem.bu.edu/trf/downloads/trf407b.macos64
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45 </action>
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46 <action type="move_file" rename_to="trf" os="darwin">
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47 <source>trf407b.macos64</source>
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48 <destination>$INSTALL_DIR/bin</destination>
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49 </action>
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50 <action type="chmod">
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51 <file mode="750">$INSTALL_DIR/bin/trf</file>
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52 </action>
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53 <action type="set_environment">
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54 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
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55 </action>
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56 </actions>
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57 </actions_group>
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58
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59 </install>
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60 <readme>The tools downloaded by this dependency definition are free for academic use.</readme>
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61 </package>
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62 </tool_dependency>