Mercurial > repos > yating-l > jbrowsearchivecreator
annotate macros.xml @ 36:b15dbdd7fd96 draft
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit a500f7ab2119cc5faaf80393bd87428389d06880
| author | yating-l | 
|---|---|
| date | Thu, 15 Feb 2018 16:51:03 -0500 | 
| parents | 7b955a58d8f2 | 
| children | b1553f2a4942 | 
| rev | line source | 
|---|---|
| 
32
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
1 <macros> | 
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7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
2 <xml name="verify_hub_structure" token_genome="Dbia3" token_test="common"> | 
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7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
3 <extra_files type="directory" value="myHub/@GENOME@/names" compare="re_match"/> | 
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7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
4 <extra_files type="directory" value="myHub/@GENOME@/seq" compare="re_match"/> | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
5 <extra_files type="directory" value="myHub/@GENOME@/tracks" compare="re_match"/> | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
6 <extra_files type="file" name="myHub/@GENOME@/css/custom_track_styles.css" value="@TEST@/myHub/@GENOME@/css/custom_track_styles.css" /> | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
7 <extra_files type="file" name="myHub/@GENOME@/tracks.conf" value="@TEST@/myHub/@GENOME@/tracks.conf" /> | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
8 <extra_files type="file" name="myHub/@GENOME@/trackList.json"> | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
9 <assert_contents> | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
10 <has_text text="tracks"/> | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
11 <has_text text="css"/> | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
12 <has_text text="names"/> | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
13 <has_text text="formatVersion"/> | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
14 </assert_contents> | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
15 </extra_files> | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
16 </xml> | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
17 | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
18 <xml name="verify_hub_structure_no_track" token_genome="Dbia3" token_test="common"> | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
19 <extra_files type="file" name="myHub/@GENOME@/trackList.json" > | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
20 <assert_contents> | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
21 <has_text text="tracks"/> | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
22 <has_text text="css"/> | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
23 <has_text text="names"/> | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
24 <has_text text="formatVersion"/> | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
25 </assert_contents> | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
26 </extra_files> | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
27 <extra_files type="file" name="myHub/@GENOME@/css/custom_track_styles.css" value="@TEST@/myHub/@GENOME@/css/custom_track_styles.css" /> | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
28 </xml> | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
29 | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
30 | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
31 | 
| 
 
7b955a58d8f2
planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
 
yating-l 
parents:  
diff
changeset
 | 
32 </macros> | 
