Mercurial > repos > yating-l > jbrowsearchivecreator

view macros.xml @ 32:7b955a58d8f2 draft

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planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
author yating-l
date Fri, 20 Oct 2017 11:22:21 -0400
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children b1553f2a4942
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<macros>
    <xml name="verify_hub_structure" token_genome="Dbia3" token_test="common">
        <extra_files type="directory" value="myHub/@GENOME@/names" compare="re_match"/>
        <extra_files type="directory" value="myHub/@GENOME@/seq" compare="re_match"/>
        <extra_files type="directory" value="myHub/@GENOME@/tracks" compare="re_match"/>
        <extra_files type="file" name="myHub/@GENOME@/css/custom_track_styles.css" value="@TEST@/myHub/@GENOME@/css/custom_track_styles.css" />
        <extra_files type="file" name="myHub/@GENOME@/tracks.conf" value="@TEST@/myHub/@GENOME@/tracks.conf" />
        <extra_files type="file" name="myHub/@GENOME@/trackList.json">
            <assert_contents>
                <has_text text="tracks"/>
                <has_text text="css"/>
                <has_text text="names"/>
                <has_text text="formatVersion"/>
            </assert_contents>
        </extra_files>
    </xml>

    <xml name="verify_hub_structure_no_track" token_genome="Dbia3" token_test="common">
        <extra_files type="file" name="myHub/@GENOME@/trackList.json" >
            <assert_contents>
                <has_text text="tracks"/>
                <has_text text="css"/>
                <has_text text="names"/>
                <has_text text="formatVersion"/>
            </assert_contents>
        </extra_files>
        <extra_files type="file" name="myHub/@GENOME@/css/custom_track_styles.css" value="@TEST@/myHub/@GENOME@/css/custom_track_styles.css" />
    </xml>

    

</macros>