annotate macros.xml @ 32:7b955a58d8f2 draft

planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
author yating-l
date Fri, 20 Oct 2017 11:22:21 -0400
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children b1553f2a4942
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7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
yating-l
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1 <macros>
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
yating-l
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2 <xml name="verify_hub_structure" token_genome="Dbia3" token_test="common">
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
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3 <extra_files type="directory" value="myHub/@GENOME@/names" compare="re_match"/>
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
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4 <extra_files type="directory" value="myHub/@GENOME@/seq" compare="re_match"/>
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
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5 <extra_files type="directory" value="myHub/@GENOME@/tracks" compare="re_match"/>
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
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6 <extra_files type="file" name="myHub/@GENOME@/css/custom_track_styles.css" value="@TEST@/myHub/@GENOME@/css/custom_track_styles.css" />
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
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7 <extra_files type="file" name="myHub/@GENOME@/tracks.conf" value="@TEST@/myHub/@GENOME@/tracks.conf" />
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
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8 <extra_files type="file" name="myHub/@GENOME@/trackList.json">
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
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9 <assert_contents>
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
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10 <has_text text="tracks"/>
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
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11 <has_text text="css"/>
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
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12 <has_text text="names"/>
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
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13 <has_text text="formatVersion"/>
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
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14 </assert_contents>
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
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15 </extra_files>
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
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16 </xml>
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18 <xml name="verify_hub_structure_no_track" token_genome="Dbia3" token_test="common">
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
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19 <extra_files type="file" name="myHub/@GENOME@/trackList.json" >
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
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20 <assert_contents>
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
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21 <has_text text="tracks"/>
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
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22 <has_text text="css"/>
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
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23 <has_text text="names"/>
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
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24 <has_text text="formatVersion"/>
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
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25 </assert_contents>
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
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26 </extra_files>
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
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27 <extra_files type="file" name="myHub/@GENOME@/css/custom_track_styles.css" value="@TEST@/myHub/@GENOME@/css/custom_track_styles.css" />
7b955a58d8f2 planemo upload for repository https://github.com/Yating-L/jbrowse-archive-creator.git commit 18da3c5b92673ba5030c24c981c6ca7ebe0bf097-dirty
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28 </xml>
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32 </macros>