Mercurial > repos > yating-l > gbtofasta

annotate tool_dependencies.xml @ 0:e51fb8c5bb1c draft

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author yating-l
date Thu, 02 Feb 2017 18:30:34 -0500
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children 3568235c44bf
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <!-- required tools:
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4 - blat
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5 - sort
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6 - pslReps
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7 - faPolyASizes
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8 - pslCDnaFilter
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9 -->
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10 <package name="ucsc_tools_340_for_BLAT" version="1.0">
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11 <install version="1.0">
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12 <actions_group>
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13 <actions architecture="x86_64" os="linux">
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14 <action type="download_by_url">http://old-gep.wustl.edu/~galaxy/package_ucsc_tools_340_for_BLAT.tar.gz</action>
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15 <action type="move_directory_files">
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16 <source_directory>.</source_directory>
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17 <destination_directory>$INSTALL_DIR/bin</destination_directory>
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18 </action>
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19 </actions>
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20 <action type="set_environment">
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21 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
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22 </action>
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23 </actions_group>
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24 </install>
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25 <readme>The tools and utilities were created by the UCSC Genome Bioinformatics Group</readme>
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26 </package>
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27 </tool_dependency>