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view tool_dependencies.xml @ 0:e51fb8c5bb1c draft

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author yating-l
date Thu, 02 Feb 2017 18:30:34 -0500
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<?xml version="1.0"?>
<tool_dependency>
    <!-- required tools:
        - blat
        - sort
        - pslReps
        - faPolyASizes
        - pslCDnaFilter
    -->
    <package name="ucsc_tools_340_for_BLAT" version="1.0">
        <install version="1.0">
            <actions_group>
                <actions architecture="x86_64" os="linux">
                    <action type="download_by_url">http://old-gep.wustl.edu/~galaxy/package_ucsc_tools_340_for_BLAT.tar.gz</action>
                    <action type="move_directory_files">
                        <source_directory>.</source_directory>
                        <destination_directory>$INSTALL_DIR/bin</destination_directory>
                    </action>
                </actions>
                <action type="set_environment">
                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
                </action>
            </actions_group>
        </install>
        <readme>The tools and utilities were created by the UCSC Genome Bioinformatics Group</readme>
    </package>
</tool_dependency>