Mercurial > repos > ximgchess > chap_test_20230411

changeset 6:39bdb54c661d draft

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planemo upload for repository https://github.com/CHESSComputing/ChessAnalysisPipeline commit 3e8c1c54d5e12fdbc4f6c5cdae88b6d054db7c45-dirty
author ximgchess
date Wed, 12 Apr 2023 10:32:05 +0000
parents 47a0648cdfd1
children 65855348c64a
files tomo/.tomo_reduce.xml.swp tomo/tomo_reduce.xml
diffstat 2 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
Binary file tomo/.tomo_reduce.xml.swp has changed
--- a/tomo/tomo_reduce.xml	Wed Apr 12 10:28:06 2023 +0000
+++ b/tomo/tomo_reduce.xml	Wed Apr 12 10:32:05 2023 +0000
@@ -6,7 +6,7 @@
     <expand macro="requirements"/>
     <command detect_errors="exit_code">
         <![CDATA[
-            cp '$input_file' output.yaml
+            cat reduce.yaml
         ]]>
     </command>
     <configfiles>
@@ -62,6 +62,7 @@
         </conditional>
     </inputs>
     <outputs>
+        <data name="tool_config" format="yaml" label="Tool config" from_work_dir="reduce.yaml" hidden="false"/>
         <!--
         <data name="tool_config" format="yaml" label="Tool config" from_work_dir="reduce.yaml" hidden="false"/>
         <collection name="tomo_reduce_plots" type="list" label="Data reduction images">
@@ -69,7 +70,6 @@
         </collection>
         <data name="output_file" format="nex" label="Reduced tomography data" from_work_dir="output.nex"/>
         -->
-        <data name="output_file" format="yaml" label="Test output" from_work_dir="output.yaml"/>
     </outputs>
     <help>
         <![CDATA[