Mercurial > repos > wolma > data_manager_packaged_annotation_data
changeset 2:a868b0edabb1 draft
"planemo upload commit 3dc5291eccd1fb516be67694c18a27bda5f69f91"
| author | wolma |
|---|---|
| date | Thu, 16 Dec 2021 20:33:48 +0000 |
| parents | 691bcbfd775d |
| children | eb47f11e34fc |
| files | data_manager/install_packaged_annotation_data.py test-data/from_test-meta.data_manager.json test-data/test-meta.yml |
| diffstat | 3 files changed, 3 insertions(+), 2 deletions(-) [+] |
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--- a/data_manager/install_packaged_annotation_data.py Thu Dec 16 18:50:18 2021 +0000 +++ b/data_manager/install_packaged_annotation_data.py Thu Dec 16 20:33:48 2021 +0000 @@ -72,7 +72,7 @@ ) def _full_record_name(self, record): - return '{0} ({1}, {2}; from {3}/vol:{4}/build{5})'.format( + return '{0} ({1}, {2}; from {3}/vol:{4}/build:{5})'.format( record['name'], record['version'], self.meta['refgenome'], self.meta['name'],
--- a/test-data/from_test-meta.data_manager.json Thu Dec 16 18:50:18 2021 +0000 +++ b/test-data/from_test-meta.data_manager.json Thu Dec 16 20:33:48 2021 +0000 @@ -1,1 +1,1 @@ -{"data_tables": {"packaged_annotation_data": [{"data_format": "bed", "data_id": "hotspots.data", "data_name": "CancerHotspots (v2, hg19; from Cancer variant data/vol:1/build2021-12-16)", "dbkey": "hg19", "package_id": "Cancer_variant_data__hg19__1__2021-12-16", "package_name": "Cancer variant data (hg19, vol:1/build:2021-12-16)", "path": "", "value": "Cancer_variant_data__hg19__1__2021-12-16:hotspots.data"}, {"data_format": "bed", "data_id": "civic.variants", "data_name": "CIViC variants (01-Feb-2019, hg19; from Cancer variant data/vol:1/build2021-12-16)", "dbkey": "hg19", "package_id": "Cancer_variant_data__hg19__1__2021-12-16", "package_name": "Cancer variant data (hg19, vol:1/build:2021-12-16)", "path": "", "value": "Cancer_variant_data__hg19__1__2021-12-16:civic.variants"}]}} \ No newline at end of file +{"data_tables": {"packaged_annotation_data": [{"data_format": "bed", "data_id": "hotspots.data", "data_name": "CancerHotspots (v2, hg19; from Cancer variant data/vol:1/build:1)", "dbkey": "hg19", "package_id": "Cancer_variant_data__hg19__1__1", "package_name": "Cancer variant data (hg19, vol:1/build:1)", "path": "1/1", "value": "Cancer_variant_data__hg19__1__1:hotspots.data"}, {"data_format": "bed", "data_id": "civic.variants", "data_name": "CIViC variants (01-Feb-2019, hg19; from Cancer variant data/vol:1/build:1)", "dbkey": "hg19", "package_id": "Cancer_variant_data__hg19__1__1", "package_name": "Cancer variant data (hg19, vol:1/build:1)", "path": "1/1", "value": "Cancer_variant_data__hg19__1__1:civic.variants"}]}} \ No newline at end of file