# HG changeset patch # User wolma # Date 1639686828 0 # Node ID a868b0edabb1a285b95d2735ebbb6b9999cec3ce # Parent 691bcbfd775db292883495927c5fb31b20c5c1a4 "planemo upload commit 3dc5291eccd1fb516be67694c18a27bda5f69f91" diff -r 691bcbfd775d -r a868b0edabb1 data_manager/install_packaged_annotation_data.py --- a/data_manager/install_packaged_annotation_data.py Thu Dec 16 18:50:18 2021 +0000 +++ b/data_manager/install_packaged_annotation_data.py Thu Dec 16 20:33:48 2021 +0000 @@ -72,7 +72,7 @@ ) def _full_record_name(self, record): - return '{0} ({1}, {2}; from {3}/vol:{4}/build{5})'.format( + return '{0} ({1}, {2}; from {3}/vol:{4}/build:{5})'.format( record['name'], record['version'], self.meta['refgenome'], self.meta['name'], diff -r 691bcbfd775d -r a868b0edabb1 test-data/from_test-meta.data_manager.json --- a/test-data/from_test-meta.data_manager.json Thu Dec 16 18:50:18 2021 +0000 +++ b/test-data/from_test-meta.data_manager.json Thu Dec 16 20:33:48 2021 +0000 @@ -1,1 +1,1 @@ -{"data_tables": {"packaged_annotation_data": [{"data_format": "bed", "data_id": "hotspots.data", "data_name": "CancerHotspots (v2, hg19; from Cancer variant data/vol:1/build2021-12-16)", "dbkey": "hg19", "package_id": "Cancer_variant_data__hg19__1__2021-12-16", "package_name": "Cancer variant data (hg19, vol:1/build:2021-12-16)", "path": "", "value": "Cancer_variant_data__hg19__1__2021-12-16:hotspots.data"}, {"data_format": "bed", "data_id": "civic.variants", "data_name": "CIViC variants (01-Feb-2019, hg19; from Cancer variant data/vol:1/build2021-12-16)", "dbkey": "hg19", "package_id": "Cancer_variant_data__hg19__1__2021-12-16", "package_name": "Cancer variant data (hg19, vol:1/build:2021-12-16)", "path": "", "value": "Cancer_variant_data__hg19__1__2021-12-16:civic.variants"}]}} \ No newline at end of file +{"data_tables": {"packaged_annotation_data": [{"data_format": "bed", "data_id": "hotspots.data", "data_name": "CancerHotspots (v2, hg19; from Cancer variant data/vol:1/build:1)", "dbkey": "hg19", "package_id": "Cancer_variant_data__hg19__1__1", "package_name": "Cancer variant data (hg19, vol:1/build:1)", "path": "1/1", "value": "Cancer_variant_data__hg19__1__1:hotspots.data"}, {"data_format": "bed", "data_id": "civic.variants", "data_name": "CIViC variants (01-Feb-2019, hg19; from Cancer variant data/vol:1/build:1)", "dbkey": "hg19", "package_id": "Cancer_variant_data__hg19__1__1", "package_name": "Cancer variant data (hg19, vol:1/build:1)", "path": "1/1", "value": "Cancer_variant_data__hg19__1__1:civic.variants"}]}} \ No newline at end of file diff -r 691bcbfd775d -r a868b0edabb1 test-data/test-meta.yml --- a/test-data/test-meta.yml Thu Dec 16 18:50:18 2021 +0000 +++ b/test-data/test-meta.yml Thu Dec 16 20:33:48 2021 +0000 @@ -1,4 +1,5 @@ name: Cancer variant data +build: 1 refgenome: hg19 records: - id: hotspots.data