Mercurial > repos > trinity_ctat > ctat_lncrna_data_manager
changeset 11:6dc7ef1d304b draft
Uploaded
author | trinity_ctat |
---|---|
date | Thu, 21 Jun 2018 13:05:03 -0400 |
parents | f90f62998d96 |
children | 7a1a78b8079b |
files | data_manager/add_ctat_lncrna_annotations.py |
diffstat | 1 files changed, 3 insertions(+), 3 deletions(-) [+] |
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--- a/data_manager/add_ctat_lncrna_annotations.py Thu Jun 21 12:52:02 2018 -0400 +++ b/data_manager/add_ctat_lncrna_annotations.py Thu Jun 21 13:05:03 2018 -0400 @@ -208,16 +208,16 @@ args = parser.parse_args() # print "Arguments are parsed." - print "\ndownload_location is {:s}".format(str(args.download_location)) + print "\ndownload_location is {:s}".format(str(_CTAT_lncrnaDownload_URL)) print "display_name is {:s}".format(str(args.display_name)) print "destination_path is {:s}\n".format(str(args.destination_path)) root_annotations_dirname = None # FIX - Prob don't need annotations_was_downloaded. Not doing anything with it. # But it indicates success downloading the annotations, so maybe should be checking it. annotations_was_downloaded = False - if (args.download_location != ""): + if (_CTAT_lncrnaDownload_URL != ""): annotations_directory, root_annotations_dirname, annotations_was_downloaded = \ - download_annotations(src_location=args.download_location, \ + download_annotations(src_location=_CTAT_lncrnaDownload_URL, \ destination=args.destination_path, \ force_download=args.force_download) else: