Mercurial > repos > trinity_ctat > ctat_genome_resource_libs_data_manager_3
changeset 12:80b2b02e23d1 draft
Removed gmap and mutation code to debug tool error.
| author | trinity_ctat |
|---|---|
| date | Fri, 19 Oct 2018 17:03:55 -0400 |
| parents | 57428396c6e4 |
| children | bef035c4468f |
| files | data_manager/add_ctat_resource_lib.xml |
| diffstat | 1 files changed, 0 insertions(+), 19 deletions(-) [+] |
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--- a/data_manager/add_ctat_resource_lib.xml Fri Oct 19 16:04:19 2018 -0400 +++ b/data_manager/add_ctat_resource_lib.xml Fri Oct 19 17:03:55 2018 -0400 @@ -38,25 +38,6 @@ --build_location="${genome_resource_library.specify_build_location.different_build_location}" #end if #end if - #if str($genome_resource_library.build_type) == "specify_built_location": - --build_location="${genome_resource_library.built_library_location}" - #end if - #if str($gmap_options.gmap_build) == "true": - --gmap_build - #if str($gmap_options.force_gmap_build) == "true": - --force_gmap_build - #end if - #end if - #if str($mutation_lib_options.mutation_build) == "true": - --download_mutation_resources_url="${mutation_lib_options.source_url}" - --cosmic_resources_location="${mutation_lib_options.cosmic_files_location}" - #if str($mutation_lib_options.force_download) == "true": - --new_mutation_download - #end if - #if str($mutation_lib_options.redo_integration) == "true": - --new_mutation_integration - #end if - #end if ]]> </command> <inputs>