changeset 15:75a494c00321 draft

Adding gmap_build back in.
author trinity_ctat
date Fri, 19 Oct 2018 17:26:50 -0400
parents 945ddfedaafd
children cf3ea18e68f8
files data_manager/add_ctat_resource_lib.xml
diffstat 1 files changed, 6 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/data_manager/add_ctat_resource_lib.xml	Fri Oct 19 17:17:05 2018 -0400
+++ b/data_manager/add_ctat_resource_lib.xml	Fri Oct 19 17:26:50 2018 -0400
@@ -16,6 +16,12 @@
             #if str($genome_resource_library.build_type) == "specify_built_location":
               --build_location="${genome_resource_library.built_library_location}"
             #end if
+            #if str($gmap_options.gmap_build) == "true":
+              --gmap_build 
+              #if str($gmap_options.force_gmap_build) == "true":
+                  --force_gmap_build
+              #end if
+            #end if
             #if str($mutation_lib_options.mutation_build) == "true":
               --download_mutation_resources_url="${mutation_lib_options.source_url}" 
               --cosmic_resources_location="${mutation_lib_options.cosmic_files_location}"