Mercurial > repos > trinity_ctat > ctat_genome_resource_libs_data_manager_3
changeset 31:0df7a729910d draft
Fixing an error message to use correct filename.
| author | trinity_ctat |
|---|---|
| date | Thu, 25 Oct 2018 10:15:53 -0400 |
| parents | 238636afb3e1 |
| children | 9b7dc7d09fda |
| files | data_manager/add_ctat_resource_lib.py |
| diffstat | 1 files changed, 1 insertions(+), 1 deletions(-) [+] |
line wrap: on
line diff
--- a/data_manager/add_ctat_resource_lib.py Tue Oct 23 12:42:27 2018 -0400 +++ b/data_manager/add_ctat_resource_lib.py Thu Oct 25 10:15:53 2018 -0400 @@ -979,7 +979,7 @@ cosmic_coding_full_path = os.path.join(cosmic_resources_loc_full_path, _COSMIC_Coding_Filename) if not (os.path.exists(cosmic_mutant_full_path) and os.path.exists(cosmic_coding_full_path)): raise IOError("Either one or both of Cosmic Resources are missing:\n\t" + \ - "{:s}\nand/or\n\t{:s}\n".format(cosmic_mutant_full_path, cosmic_mutant_full_path) + \ + "{:s}\nand/or\n\t{:s}\n".format(cosmic_mutant_full_path, cosmic_coding_full_path) + \ "Unable to integrate mutation resources.\n{:s}".format(end_err_msg)) # Create the integration command. We also must define PICARD_HOME for the command to work. picard_home = find_path_to_picard_home()