# HG changeset patch # User trinity_ctat # Date 1540476953 14400 # Node ID 0df7a729910d8aef6fa16b1c52885f59247933b2 # Parent 238636afb3e106a672557eb6a83e02f93dfa4d3b Fixing an error message to use correct filename. diff -r 238636afb3e1 -r 0df7a729910d data_manager/add_ctat_resource_lib.py --- a/data_manager/add_ctat_resource_lib.py Tue Oct 23 12:42:27 2018 -0400 +++ b/data_manager/add_ctat_resource_lib.py Thu Oct 25 10:15:53 2018 -0400 @@ -979,7 +979,7 @@ cosmic_coding_full_path = os.path.join(cosmic_resources_loc_full_path, _COSMIC_Coding_Filename) if not (os.path.exists(cosmic_mutant_full_path) and os.path.exists(cosmic_coding_full_path)): raise IOError("Either one or both of Cosmic Resources are missing:\n\t" + \ - "{:s}\nand/or\n\t{:s}\n".format(cosmic_mutant_full_path, cosmic_mutant_full_path) + \ + "{:s}\nand/or\n\t{:s}\n".format(cosmic_mutant_full_path, cosmic_coding_full_path) + \ "Unable to integrate mutation resources.\n{:s}".format(end_err_msg)) # Create the integration command. We also must define PICARD_HOME for the command to work. picard_home = find_path_to_picard_home()