Mercurial > repos > tomnl > anticipated_purity_lcms

changeset 24:1d0ae59b2771 draft

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planemo upload for repository https://github.com/computational-metabolomics/mspurity-galaxy commit 04023134d8f28e85927ca293373c506484149ead-dirty
author tomnl
date Sat, 02 Jun 2018 05:17:38 -0400
parents b48824808bab
children 3cd819b391d6
files create_sqlite_db.R
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/create_sqlite_db.R	Fri Jun 01 15:31:47 2018 -0400
+++ b/create_sqlite_db.R	Sat Jun 02 05:17:38 2018 -0400
@@ -213,7 +213,7 @@
 
 if (is.null(xset)){
   DBI::dbWriteTable(con, name='xset_classes', value=xa@xcmsSet@phenoData, row.names=TRUE)
-  add_probmetab(opt$probmetab_result, xset,  con)
+  add_probmetab(opt$probmetab_result, xa@xcmsSet,  con)
 }else{
 
   DBI::dbWriteTable(con, name='xset_classes', value=xset@phenoData, row.names=TRUE)