view g_stemmer.xml @ 3:0df72a8ab095 draft default tip

planemo upload for repository https://github.com/Alveo/alveo-galaxy-tools commit f2432aaedd36ae7662873623d8861d0982dffdd2
author stevecassidy
date Mon, 20 Nov 2017 22:52:11 -0500
parents e991d4e60c17
children
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<tool id="Stemmer" name="Stemmer" version="1.0">
    <description>Takes a list of tokens and generates a list of word stems using one of the stemming algorithms</description>

    <requirements>
        <requirement type="package" version="3.2.1">nltk</requirement>
    </requirements>
    
    <command interpreter="python">
        g_stemmer.py --input $input1 --output $tab_file --stemmer $stemming_algorithm
    </command>

    <inputs>
        <param name="input1" type="data" format="txt" label="Select a suitable input file from your history"/>
        <param name="stemming_algorithm" type="select" label="Select the stemming algorithm to be used">
            <option value="lancaster">Lancaster Stemmer</option>
            <option value="porter">Porter Stemmer</option>
            <option value="snowball">Snowball English Stemmer</option>
        </param>
        <param name="job_name" type="text" size="25"
               label="Supply a name for the outputs to remind you what they contain" value="Stemmer"/>

    </inputs>
    <outputs>
        <data format="tabular" name="tab_file" label="${job_name}"/>

    </outputs>
    <options refresh="True"/>
    <help>
        <![CDATA[

Input is a list of tokens, uses one of the NLTK stemming algorithms to generate a list of word stems.

]]>

    </help>
</tool>