Mercurial > repos > stef > qdnaseq_test
changeset 15:233dc7c38b65 draft
Uploaded
| author | stef |
|---|---|
| date | Thu, 06 Nov 2014 04:23:35 -0500 |
| parents | 92d2691d30e5 |
| children | d62ae138863c |
| files | tool_dependencies.xml |
| diffstat | 1 files changed, 2 insertions(+), 5 deletions(-) [+] |
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--- a/tool_dependencies.xml Thu Nov 06 04:22:05 2014 -0500 +++ b/tool_dependencies.xml Thu Nov 06 04:23:35 2014 -0500 @@ -4,12 +4,9 @@ <package name="samtools" version="0.1.18"> <repository changeset_revision="c0f72bdba484" name="package_samtools_0_1_18" owner="devteam" prior_installation_required="TRUE" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> - - <!-- As soon as R 3_1_0 package works good, all dependencies will be set via "package_qdnaseq_1_0_5" --> - <!-- Currently these have to be manually installed by installing Bioconductor package "QDNAseq" --> - <package name="R" version="3.1.0"> - <repository changeset_revision="a6cc7706ea14" name="package_r_3_1_0" owner="iuc" prior_installation_required="TRUE" toolshed="https://testtoolshed.g2.bx.psu.edu" /> + <package name="R_3_1_1" version="3.1.1"> + <repository changeset_revision="d9964efbfbe3" name="package_r_3_1_1" owner="fubar" prior_installation_required="TRUE" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> <package name="qdnaseq" version="1.0.5">