# HG changeset patch
# User stef
# Date 1415265815 18000
# Node ID 233dc7c38b652a6d08384af700b5e55000f182e9
# Parent  92d2691d30e592cb44c46d2f1d88840793b7ccef
Uploaded

diff -r 92d2691d30e5 -r 233dc7c38b65 tool_dependencies.xml
--- a/tool_dependencies.xml	Thu Nov 06 04:22:05 2014 -0500
+++ b/tool_dependencies.xml	Thu Nov 06 04:23:35 2014 -0500
@@ -4,12 +4,9 @@
     <package name="samtools" version="0.1.18">
         <repository changeset_revision="c0f72bdba484" name="package_samtools_0_1_18" owner="devteam" prior_installation_required="TRUE" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
-
-    <!-- As soon as R 3_1_0 package works good, all dependencies will be set via "package_qdnaseq_1_0_5" -->
-    <!-- Currently these have to be manually installed by installing Bioconductor package "QDNAseq" -->
     
-    <package name="R" version="3.1.0">
-        <repository changeset_revision="a6cc7706ea14" name="package_r_3_1_0" owner="iuc" prior_installation_required="TRUE" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    <package name="R_3_1_1" version="3.1.1">
+        <repository changeset_revision="d9964efbfbe3" name="package_r_3_1_1" owner="fubar" prior_installation_required="TRUE" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     
     <package name="qdnaseq" version="1.0.5">