Mercurial > repos > stef > qdnaseq

changeset 11:821fb6bdbbeb draft

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Uploaded
author stef
date Mon, 16 Jun 2014 08:11:03 -0400
parents b408285701b1
children 7318921f937c
files tool_dependencies.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Mon Jun 16 07:56:15 2014 -0400
+++ b/tool_dependencies.xml	Mon Jun 16 08:11:03 2014 -0400
@@ -15,12 +15,12 @@
 				<!--<action type="download_by_url">
 					http://bioconductor.org/packages/release/bioc/src/contrib/QDNAseq_1.0.5.tar.gz
 				</action>-->
-				<action type="shell_command">wget http://bioconductor.org/packages/release/bioc/src/contrib/QDNAseq_1.0.5.tar.gz</action>
 				<action type="set_environment_for_install">
 					<repository changeset_revision="232ebc8b1c0d" name="package_r_3_0_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu/">
 						<package name="R" version="3.0.3" />
 					</repository>
 				</action>
+				<action type="shell_command">wget http://bioconductor.org/packages/release/bioc/src/contrib/QDNAseq_1.0.5.tar.gz</action>
 				<action type="shell_command">ls -l &amp;&amp; echo "print dir" &amp;&amp; pwd</action>
 				<action type="shell_command">export R_LIBS=$INSTALL_DIR &amp;&amp; R CMD INSTALL QDNAseq_1.0.5.tar.gz</action>
 				<!--<action type="shell_command">R CMD INSTALL QDNAseq_1.0.5.tar.gz</action>-->