Mercurial > repos > stef > falco

changeset 23:a19fec3d80c4 draft

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Uploaded
author stef
date Wed, 08 Oct 2014 08:11:58 -0400
parents c81c86065baf
children 4b4fba5eab4d
files falco.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/falco.xml	Wed Oct 08 07:51:28 2014 -0400
+++ b/falco.xml	Wed Oct 08 08:11:58 2014 -0400
@@ -32,7 +32,7 @@
   <command interpreter="bash">
     <!--falco.sh $bam $bam.name $html_output $vcf_output ${html_output.files_path} &amp;&amp;; echo "ECHO PRINT"; -->
     <!-- falco.sh $falco_cfg \$JAVA_JAR_PATH \$SNPEFF_JAR_PATH; -->
-    falco.sh $falco_cfg \$JAR_PATH1;
+    falco.sh $falco_cfg \$SNPEFF_JAR_PATH;
   </command>
   <!--
   <command interpreter="bash">