# HG changeset patch
# User stef
# Date 1412770318 14400
# Node ID a19fec3d80c4bc216ebe491e06534ad0a2f5cb28
# Parent  c81c86065bafe5662d0fb00d34293063815cd3c7
Uploaded

diff -r c81c86065baf -r a19fec3d80c4 falco.xml
--- a/falco.xml	Wed Oct 08 07:51:28 2014 -0400
+++ b/falco.xml	Wed Oct 08 08:11:58 2014 -0400
@@ -32,7 +32,7 @@
   <command interpreter="bash">
     <!--falco.sh $bam $bam.name $html_output $vcf_output ${html_output.files_path} &amp;&amp;; echo "ECHO PRINT"; -->
     <!-- falco.sh $falco_cfg \$JAVA_JAR_PATH \$SNPEFF_JAR_PATH; -->
-    falco.sh $falco_cfg \$JAR_PATH1;
+    falco.sh $falco_cfg \$SNPEFF_JAR_PATH;
   </command>
   <!--
   <command interpreter="bash">