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changeset 86:6be0171ad589 draft

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Uploaded
author stef
date Thu, 23 Apr 2015 09:50:56 -0400
parents 01305ba40dce
children b0a46916df02
files falco-call.xml
diffstat 1 files changed, 2 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/falco-call.xml	Thu Apr 23 09:50:45 2015 -0400
+++ b/falco-call.xml	Thu Apr 23 09:50:56 2015 -0400
@@ -4,13 +4,14 @@
     
     <requirement type="package" version="0.1.19">samtools</requirement>
     <requirement type="package" version="3.0.1">R</requirement>
+    <requirement type="set_environment">FALCO_PATH</requirement>
     
   </requirements>
 
   <description>FALCO: Amplicon Analysis Pipeline</description>
 
   <command interpreter="bash">
-    falco-call.sh $falco_cfg;
+    falco-call.sh $falco_cfg \$FALCO_PATH;
   </command>
 
   <stdio>