# HG changeset patch
# User stef
# Date 1429797056 14400
# Node ID 6be0171ad589911c187505fc4a11b923ca48c4a2
# Parent  01305ba40dced51baa1ef3def843718151c6beab
Uploaded

diff -r 01305ba40dce -r 6be0171ad589 falco-call.xml
--- a/falco-call.xml	Thu Apr 23 09:50:45 2015 -0400
+++ b/falco-call.xml	Thu Apr 23 09:50:56 2015 -0400
@@ -4,13 +4,14 @@
     
     <requirement type="package" version="0.1.19">samtools</requirement>
     <requirement type="package" version="3.0.1">R</requirement>
+    <requirement type="set_environment">FALCO_PATH</requirement>
     
   </requirements>
 
   <description>FALCO: Amplicon Analysis Pipeline</description>
 
   <command interpreter="bash">
-    falco-call.sh $falco_cfg;
+    falco-call.sh $falco_cfg \$FALCO_PATH;
   </command>
 
   <stdio>