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1 <tool id="wigmaker" name="WigMaker" version="3">
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2 <description>for BED files</description>
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3
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4 <requirements>
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5 <requirement type="package" version="3">wigmaker</requirement>
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6 </requirements>
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7
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8 <command interpreter="bash">wigmaker.sh $input $output \$JAVA_JAR_PATH/WigMaker3.jar</command>
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9 <inputs>
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10 <param format="interval" name="input" type="data" label="Source file"/>
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11 </inputs>
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12 <outputs>
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13 <data format="wig" name="output" label="${tool.name} on ${on_string} (wig)" />
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14 </outputs>
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15
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16 <tests>
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17 <test>
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18 <param name="input" value="fa_gc_content_input.fa"/>
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19 <output name="out_file" file="fa_gc_content_output.txt"/>
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20 </test>
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21 </tests>
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22
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23 <help>
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24 This tool generates WIG files from BED files. (Developped by Tao Ye).
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25 </help>
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26 </tool>
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27
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