diff wigmaker.xml @ 0:963fc31e3269 draft default tip

Uploaded
author slegras
date Fri, 09 Oct 2015 09:17:29 -0400
parents
children
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/wigmaker.xml	Fri Oct 09 09:17:29 2015 -0400
@@ -0,0 +1,28 @@
+<tool id="wigmaker" name="WigMaker" version="3">
+  <description>for BED files</description>
+
+  <requirements>
+    <requirement type="package" version="3">wigmaker</requirement>
+  </requirements>
+
+  <command interpreter="bash">wigmaker.sh $input $output \$JAVA_JAR_PATH/WigMaker3.jar</command>
+  <inputs>
+    <param format="interval" name="input" type="data" label="Source file"/>
+  </inputs>
+  <outputs>
+    <data format="wig" name="output" label="${tool.name} on ${on_string} (wig)" />
+  </outputs>
+ 
+  <tests>
+    <test>
+      <param name="input" value="fa_gc_content_input.fa"/>
+      <output name="out_file" file="fa_gc_content_output.txt"/>
+    </test>
+  </tests>
+
+  <help>
+     This tool generates WIG files from BED files. (Developped by Tao Ye).
+  </help>
+</tool>
+
+