Mercurial > repos > simon-gladman > velvet_optimiser_2_2_5

changeset 10:b1043aaf771d draft

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Uploaded
author simon-gladman
date Tue, 23 Jul 2013 04:18:00 -0400
parents 26b1bd2d7175
children f931896fad96
files velvet_optimiser_wrapper_vlsci.pl
diffstat 1 files changed, 2 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/velvet_optimiser_wrapper_vlsci.pl	Tue Jul 23 03:56:00 2013 -0400
+++ b/velvet_optimiser_wrapper_vlsci.pl	Tue Jul 23 04:18:00 2013 -0400
@@ -24,6 +24,7 @@
 use strict;
 use warnings;
 use File::Copy;
+use Env qw (PATH);
 
 my @stuff = @ARGV;
 my %counts;
@@ -135,7 +136,7 @@
 $cmd .= " 2> $stderr";
 
 print "\n$cmd\n";
-print "PATH=" . system('echo $PATH') . "\n";
+print "PATH= $PATH\n";
 
 print "about to run the command!\n";