Mercurial > repos > simon-gladman > trimmomatic_032

changeset 5:afc124ad65f0 draft

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Uploaded
author simon-gladman
date Wed, 09 Jul 2014 18:05:32 -0400
parents e131e21fce1f
children 9db0c1c78236
files trimmomatic.xml
diffstat 1 files changed, 4 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/trimmomatic.xml	Wed Jul 09 17:39:07 2014 -0400
+++ b/trimmomatic.xml	Wed Jul 09 18:05:32 2014 -0400
@@ -148,6 +148,10 @@
         <data name="singles" format="fastq" label="${tool.name} on ${on_string}: trimmed reads"/>
         <data name="dummy_out" format="tabular" label="${tool.name} on ${on_string}: DEBUG OUTPUT" hidden="True"/>
     </outputs>
+    
+    <stdio>
+         <exit_code range="1:"   level="fatal"   description="Trimmomatic error" />
+    </stdio>
     <help>
 ***Trimmomatic***