changeset 19:c08d47a36c1f draft

planemo upload for repository https://github.com/sblanck/smagexp/tree/master/smagexp_tools commit 840095a764f473452cdef12053ca9b255267237e-dirty
author sblanck
date Sat, 16 Dec 2017 10:46:19 -0500
parents 3d867f8a07ef
children a4015af2ae12
files AffyQCnormalization.xml Analyse.xml GEOQuery.xml
diffstat 3 files changed, 5 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/AffyQCnormalization.xml	Sat Dec 16 10:18:15 2017 -0500
+++ b/AffyQCnormalization.xml	Sat Dec 16 10:46:19 2017 -0500
@@ -12,7 +12,8 @@
         <requirement type="package">bioconductor-affyPLM</requirement>
         <requirement type="package">r-jsonlite</requirement>
         <requirement type="package">r-dplyr</requirement>
-     </requirements>
+        <requirement type="package">r-optparse</requirement>
+    </requirements>
 
     <stdio>
         <exit_code range="1:" />
--- a/Analyse.xml	Sat Dec 16 10:18:15 2017 -0500
+++ b/Analyse.xml	Sat Dec 16 10:46:19 2017 -0500
@@ -3,8 +3,8 @@
     <description>Performs gene expression analysis thanks to limma</description>
 
     <requirements>
-        <requirement type="package" version="2.38.0">bioconductor-biobase</requirement>
-        <requirement type="package" version="2.46.3">bioconductor-geoquery</requirement>
+        <requirement type="package">bioconductor-biobase</requirement>
+        <requirement type="package">bioconductor-geoquery</requirement>
         <requirement type="package">bioconductor-geometadb</requirement>
         <requirement type="package">bioconductor-limma</requirement>
         <requirement type="package">bioconductor-affy</requirement>
--- a/GEOQuery.xml	Sat Dec 16 10:18:15 2017 -0500
+++ b/GEOQuery.xml	Sat Dec 16 10:46:19 2017 -0500
@@ -4,7 +4,7 @@
 
     <requirements>
         <requirement type="package" version="2.42.0">bioconductor-geoquery</requirement>
-        <requirement type="package" version="1.4.4">r-optparse</requirement>
+        <requirement type="package">r-optparse</requirement>
     </requirements>
     <stdio>
         <exit_code range="1:" />