Mercurial > repos > sanbi-uwc > gatk2
changeset 5:6e5c52be3502 draft
planemo upload for repository https://github.com/SANBI-SA/tools-sanbi-uwc/tree/master/tools/gatk2 commit 53a7810567099d231d48b442196c0bb79e664019
| author | sanbi-uwc |
|---|---|
| date | Fri, 20 Apr 2018 04:14:46 -0400 |
| parents | 5805746de7f0 |
| children | 3a0582c3fb06 |
| files | tool_dependencies.xml variant_recalibrator.xml |
| diffstat | 2 files changed, 5 insertions(+), 4 deletions(-) [+] |
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--- a/tool_dependencies.xml Fri Apr 20 03:42:17 2018 -0400 +++ b/tool_dependencies.xml Fri Apr 20 04:14:46 2018 -0400 @@ -24,7 +24,8 @@ <package name="picard" version="1.56.0"> <repository changeset_revision="7206dbf34dcd" name="package_picard_1_56_0" owner="devteam" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> - <package name="ggplot2" version="0.9.3"> - <repository changeset_revision="ade406d47752" name="package_r_ggplot2_0_9_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> - </package> + <!-- <package name="ggplot2" version="0.9.3"> + <repository name="package_r_ggplot2_0_9_3" owner="iuc" /> + </package> --> + </tool_dependency>
--- a/variant_recalibrator.xml Fri Apr 20 03:42:17 2018 -0400 +++ b/variant_recalibrator.xml Fri Apr 20 04:14:46 2018 -0400 @@ -4,7 +4,7 @@ <import>gatk2_macros.xml</import> </macros> <expand macro="requirements"> - <requirement type="package" version="0.9.3">ggplot2</requirement> + <requirement type="package" version="2.2.1">ggplot2</requirement> </expand> <expand macro="version_command" /> <command interpreter="python">