# HG changeset patch
# User sanbi-uwc
# Date 1524212086 14400
# Node ID 6e5c52be350279dce5468a75fc6b767b2d941b57
# Parent  5805746de7f08df1444247b775daba3f5d7bb55c
planemo upload for repository https://github.com/SANBI-SA/tools-sanbi-uwc/tree/master/tools/gatk2 commit 53a7810567099d231d48b442196c0bb79e664019

diff -r 5805746de7f0 -r 6e5c52be3502 tool_dependencies.xml
--- a/tool_dependencies.xml	Fri Apr 20 03:42:17 2018 -0400
+++ b/tool_dependencies.xml	Fri Apr 20 04:14:46 2018 -0400
@@ -24,7 +24,8 @@
     <package name="picard" version="1.56.0">
         <repository changeset_revision="7206dbf34dcd" name="package_picard_1_56_0" owner="devteam" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
-    <package name="ggplot2" version="0.9.3">
-        <repository changeset_revision="ade406d47752" name="package_r_ggplot2_0_9_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-    </package>
+    <!-- <package name="ggplot2" version="0.9.3">
+        <repository name="package_r_ggplot2_0_9_3" owner="iuc" />
+    </package> -->
+    
 </tool_dependency>
diff -r 5805746de7f0 -r 6e5c52be3502 variant_recalibrator.xml
--- a/variant_recalibrator.xml	Fri Apr 20 03:42:17 2018 -0400
+++ b/variant_recalibrator.xml	Fri Apr 20 04:14:46 2018 -0400
@@ -4,7 +4,7 @@
     <import>gatk2_macros.xml</import>
   </macros>
   <expand macro="requirements">
-    <requirement type="package" version="0.9.3">ggplot2</requirement>
+    <requirement type="package" version="2.2.1">ggplot2</requirement>
   </expand>
   <expand macro="version_command" />
   <command interpreter="python">