Mercurial > repos > sanbi-uwc > data_manager_fetch_refseq

changeset 4:efe0f451c40f draft

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planemo upload for repository https://github.com/pvanheus/refseq_fasta_data_manager commit b682adad2c3c74567d23e1a5cf2bfcc3df1c96ae-dirty
author sanbi-uwc
date Fri, 07 Sep 2018 19:00:00 -0400
parents 4852eb1a75e5
children f992a51def8d
files data_manager/fetch_refseq.xml data_manager_conf.xml
diffstat 2 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/data_manager/fetch_refseq.xml	Fri Sep 07 18:41:23 2018 -0400
+++ b/data_manager/fetch_refseq.xml	Fri Sep 07 19:00:00 2018 -0400
@@ -1,4 +1,4 @@
-<tool id="data_manager_fetch_refseq" name="RefSeq data manager" version="0.0.4" tool_type="manage_data">
+<tool id="data_manager_fetch_refseq" name="RefSeq data manager" version="0.0.5" tool_type="manage_data">
     <description>Fetch FASTA data from NCBI RefSeq and update all_fasta data table</description>
     <requirements>
         <requirement type="package" version="3">python</requirement>
--- a/data_manager_conf.xml	Fri Sep 07 18:41:23 2018 -0400
+++ b/data_manager_conf.xml	Fri Sep 07 19:00:00 2018 -0400
@@ -6,7 +6,7 @@
                 <column name="value" />
                 <column name="dbkey" />
                 <column name="name" />
-                <column name="path" output_ref="out_file" >
+                <column name="path" output_ref="output_file" >
                     <move type="file">
                         <source>${path}</source>
                         <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/seq/${path}</target>