diff data_manager_conf.xml @ 19:d118e256faca draft default tip

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_fetch_refseq commit 120c6491f4b0888220e432693a9805d8198d7397"

--- a/data_manager_conf.xml	Fri Sep 28 23:46:24 2018 -0400
+++ b/data_manager_conf.xml	Thu Apr 16 10:19:57 2020 +0000
@@ -1,17 +1,16 @@
 <?xml version="1.0"?>
 <data_managers>    
-    <data_manager tool_file="data_manager/fetch_refseq.xml" id="fetch_genome_fetch_refseq">
-        <data_table name="all_fasta">
+    <data_manager tool_file="data_manager/fetch_artic_primers.xml" id="fetch_artic_primers">
+        <data_table name="artic_primers">
             <output>
                 <column name="value" />
-                <column name="dbkey" />
-                <column name="name" />
+                <column name="description" />
                 <column name="path" output_ref="output_file" >
                     <move type="file">
                         <source>${path}</source>
-                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">refseq/#echo str($dbkey).split('.')[1]#/${value}.fasta</target>
+                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">artic_primers/#echo str($name).bed#</target>
                     </move>
-                    <value_translation>refseq/#echo str($dbkey).split('.')[1]#/${value}.fasta</value_translation>
+                    <value_translation>artic_primers/#echo str($name).bed#</value_translation>
                     <value_translation type="function">abspath</value_translation>
                 </column>
             </output>