Mercurial > repos > sanbi-uwc > build_ctb_gene

changeset 21:04f49a2f5ec9 draft

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planemo upload for repository https://github.com/SANBI-SA/tools-sanbi-uwc.git commit 9486c76fae458504e5a97bcbc028a225b8d8284b
author sanbi-uwc
date Thu, 19 May 2016 08:32:30 -0400
parents 06bd61e33a18
children f62c95374715
files build_ctb_gene.py
diffstat 1 files changed, 3 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/build_ctb_gene.py	Thu May 19 08:21:43 2016 -0400
+++ b/build_ctb_gene.py	Thu May 19 08:32:30 2016 -0400
@@ -53,10 +53,10 @@
         # retrieve neo4j files to the working gx directory
         result_file = glob.glob(self.args.mount_point + '/*')
         for file_name in result_file:
-            if os.path.isfile(file_name):
+            if os.path.isdir(file_name):
+                shutil.copytree(file_name, self.args.outputdir)
+            elif os.path.isfile(file_name):
                 shutil.copy(file_name, self.args.outputdir)
-            else:
-                shutil.copytree(file_name, self.args.outputdir)
 
 
 def main():