diff tool_dependencies.xml @ 0:28a85319a3c6 draft

Uploaded

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Fri Jun 05 05:47:06 2015 -0400
@@ -0,0 +1,22 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="vienna_rna" version="2.1.5">
+        <repository changeset_revision="b77eb5bc6ad8" name="package_vienna_rna_2_1_5" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="compalignp" version="1.0">
+        <install version="1.0">
+            <actions>
+                <action type="download_by_url">http://www.biophys.uni-duesseldorf.de/bralibase/compalignp.tgz</action>
+                <action type="set_environment_for_install">
+                    <repository changeset_revision="8ebcef4aedfb" name="package_squid_1_9g" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                        <package name="squid" version="1.9g" />
+                    </repository>
+                </action>
+                <action type="shell_command">make" </action>
+                <action type="set_environment">
+                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR</environment_variable>
+                </action>
+            </actions>
+        </install>
+    </package>
+</tool_dependency>