view tool_dependencies.xml @ 8:8ebf2202a0d1 draft default tip

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author rnateam
date Mon, 08 Jun 2015 08:31:57 -0400
parents b6f7e13b40f2
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<?xml version="1.0"?>
<tool_dependency>
    <package name="squid" version="1.9g">
        <repository changeset_revision="8ebcef4aedfb" name="package_squid_1_9g" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="compalignp" version="1.0">
        <install version="1.0">
            <actions>
                <action type="download_by_url">http://www.biophys.uni-duesseldorf.de/bralibase/compalignp.tgz</action>
                <action type="set_environment_for_install">
                    <repository changeset_revision="8ebcef4aedfb" name="package_squid_1_9g" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                        <package name="squid" version="1.9g" />
                    </repository>
                </action>
                <action type="shell_command">make</action>
                <action type="move_file">
                    <source>compalignp</source>
                    <destination>$INSTALL_DIR/bin</destination>
                </action>
                <action type="set_environment">
                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
                </action>
                <environment_variable action="set_to" name="COMPALIGNP_ROOT_PATH">$INSTALL_DIR/bin</environment_variable>
            </actions>
        </install>
    </package>
</tool_dependency>