Mercurial > repos > rnateam > bctools
diff extract_aln_ends.xml @ 6:1bfc5a5de843 draft
Uploaded
author | rnateam |
---|---|
date | Wed, 04 Nov 2015 07:18:06 -0500 |
parents | 119fccb59597 |
children | 570a7de9f151 |
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--- a/extract_aln_ends.xml Fri Oct 23 07:28:06 2015 -0400 +++ b/extract_aln_ends.xml Wed Nov 04 07:18:06 2015 -0500 @@ -1,5 +1,5 @@ -<tool id="extract_aln_ends.py" name="extract_aln_ends.py" version="0.1.0"> - <description>Extract alignment ends from sam file.</description> +<tool id="extract_aln_ends.py" name="Extract alignment ends" version="0.1.0"> + <description>from a sam file</description> <macros> <import>macros.xml</import> </macros> @@ -37,9 +37,11 @@ ("forward-reverse") direction. Input: + * sam file containing alignments (paired-end sequencing) Output: + * bed6 file containing outer coordinates (sorted by read id) Author: Daniel Maticzka