Mercurial > repos > pjbriggs > amplicon_analysis_pipeline

annotate tool_dependencies.xml @ 50:dac038bd896d draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 1bfd74460fc09c264bf55d33a999a8291f2299cb-dirty
author pjbriggs
date Thu, 19 Dec 2019 09:58:41 +0000
parents 496cc0ddce3d
children 5cbc70d1c2af
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
42
098ad1dd7760 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 10be6f00106e853a6720e4052871d9d84e027137
pjbriggs
parents:
diff changeset
1 <?xml version="1.0"?>
098ad1dd7760 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 10be6f00106e853a6720e4052871d9d84e027137
pjbriggs
parents:
diff changeset
2 <tool_dependency>
50
dac038bd896d planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 1bfd74460fc09c264bf55d33a999a8291f2299cb-dirty
pjbriggs
parents: 43
diff changeset
3 <package name="amplicon_analysis_pipeline" version="1.3.6">
42
098ad1dd7760 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 10be6f00106e853a6720e4052871d9d84e027137
pjbriggs
parents:
diff changeset
4 <install version="1.0">
098ad1dd7760 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 10be6f00106e853a6720e4052871d9d84e027137
pjbriggs
parents:
diff changeset
5 <actions>
50
dac038bd896d planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 1bfd74460fc09c264bf55d33a999a8291f2299cb-dirty
pjbriggs
parents: 43
diff changeset
6 <action type="download_file">https://raw.githubusercontent.com/pjbriggs/Amplicon_analysis-galaxy/update-to-Amplicon_analysis_pipeline-1.3/install_amplicon_analysis-1.3.6.sh</action>
42
098ad1dd7760 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 10be6f00106e853a6720e4052871d9d84e027137
pjbriggs
parents:
diff changeset
7 <action type="shell_command">
50
dac038bd896d planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 1bfd74460fc09c264bf55d33a999a8291f2299cb-dirty
pjbriggs
parents: 43
diff changeset
8 sh ./install_amplicon_analysis-1.3.6.sh $INSTALL_DIR
42
098ad1dd7760 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 10be6f00106e853a6720e4052871d9d84e027137
pjbriggs
parents:
diff changeset
9 </action>
098ad1dd7760 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 10be6f00106e853a6720e4052871d9d84e027137
pjbriggs
parents:
diff changeset
10 <action type="set_environment">
098ad1dd7760 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 10be6f00106e853a6720e4052871d9d84e027137
pjbriggs
parents:
diff changeset
11 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/Amplicon_analysis-1.3.5/bin</environment_variable>
098ad1dd7760 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 10be6f00106e853a6720e4052871d9d84e027137
pjbriggs
parents:
diff changeset
12 </action>
098ad1dd7760 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 10be6f00106e853a6720e4052871d9d84e027137
pjbriggs
parents:
diff changeset
13 </actions>
098ad1dd7760 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 10be6f00106e853a6720e4052871d9d84e027137
pjbriggs
parents:
diff changeset
14 </install>
098ad1dd7760 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 10be6f00106e853a6720e4052871d9d84e027137
pjbriggs
parents:
diff changeset
15 </package>
098ad1dd7760 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 10be6f00106e853a6720e4052871d9d84e027137
pjbriggs
parents:
diff changeset
16 </tool_dependency>