Mercurial > repos > pjbriggs > amplicon_analysis_pipeline

annotate tool_dependencies.xml @ 36:c9ed9443f293 draft

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planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 601f7d1e21b25c583cc6e1a563029bab3f226921-dirty
author pjbriggs
date Tue, 16 Oct 2018 09:48:37 -0400
parents 44f5057fc878
children d19fca1c009c
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45db1f97795c planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit e75f078692e313af3295d2d991fcd8d61270242f
pjbriggs
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1 <?xml version="1.0"?>
45db1f97795c planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit e75f078692e313af3295d2d991fcd8d61270242f
pjbriggs
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2 <tool_dependency>
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3512b135ecb0 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 601f7d1e21b25c583cc6e1a563029bab3f226921-dirty
pjbriggs
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3 <package name="amplicon_analysis_pipeline-all" version="1.2.3">
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545f23776953 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 993dae6791b28d776b116153e834192435084ef5
pjbriggs
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4 <install version="1.0">
545f23776953 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 993dae6791b28d776b116153e834192435084ef5
pjbriggs
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5 <actions>
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c9ed9443f293 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 601f7d1e21b25c583cc6e1a563029bab3f226921-dirty
pjbriggs
parents: 35
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6 <action type="download_file">https://raw.githubusercontent.com/pjbriggs/Amplicon_analysis-galaxy/5fe08ecabf682265778d6307fa63a44c768d251c/install_amplicon_analysis.sh</action>
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3512b135ecb0 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 601f7d1e21b25c583cc6e1a563029bab3f226921-dirty
pjbriggs
parents: 28
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7 <action type="shell_command">
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c9ed9443f293 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 601f7d1e21b25c583cc6e1a563029bab3f226921-dirty
pjbriggs
parents: 35
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8 sh ./install_amplicon_analysis.sh $INSTALL_DIR
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545f23776953 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 993dae6791b28d776b116153e834192435084ef5
pjbriggs
parents: 21
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9 </action>
545f23776953 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 993dae6791b28d776b116153e834192435084ef5
pjbriggs
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10 <action type="set_environment">
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3512b135ecb0 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 601f7d1e21b25c583cc6e1a563029bab3f226921-dirty
pjbriggs
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11 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/Amplicon_analysis-1.2.3/bin</environment_variable>
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545f23776953 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 993dae6791b28d776b116153e834192435084ef5
pjbriggs
parents: 21
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12 </action>
545f23776953 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 993dae6791b28d776b116153e834192435084ef5
pjbriggs
parents: 21
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13 </actions>
545f23776953 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 993dae6791b28d776b116153e834192435084ef5
pjbriggs
parents: 21
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14 </install>
545f23776953 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 993dae6791b28d776b116153e834192435084ef5
pjbriggs
parents: 21
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15 </package>
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45db1f97795c planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit e75f078692e313af3295d2d991fcd8d61270242f
pjbriggs
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16 </tool_dependency>