Mercurial > repos > pjbriggs > amplicon_analysis_pipeline

annotate tool_dependencies.xml @ 34:3512b135ecb0 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 601f7d1e21b25c583cc6e1a563029bab3f226921-dirty
author pjbriggs
date Mon, 15 Oct 2018 10:40:41 -0400
parents b355098dc1f6
children 44f5057fc878
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
6
45db1f97795c planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit e75f078692e313af3295d2d991fcd8d61270242f
pjbriggs
parents:
diff changeset
1 <?xml version="1.0"?>
45db1f97795c planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit e75f078692e313af3295d2d991fcd8d61270242f
pjbriggs
parents:
diff changeset
2 <tool_dependency>
34
3512b135ecb0 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 601f7d1e21b25c583cc6e1a563029bab3f226921-dirty
pjbriggs
parents: 28
diff changeset
3 <package name="amplicon_analysis_pipeline-all" version="1.2.3">
23
545f23776953 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 993dae6791b28d776b116153e834192435084ef5
pjbriggs
parents: 21
diff changeset
4 <install version="1.0">
545f23776953 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 993dae6791b28d776b116153e834192435084ef5
pjbriggs
parents: 21
diff changeset
5 <actions>
34
3512b135ecb0 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 601f7d1e21b25c583cc6e1a563029bab3f226921-dirty
pjbriggs
parents: 28
diff changeset
6 <action type="download_file">https://raw.githubusercontent.com/pjbriggs/Amplicon_analysis-galaxy/88289d6e8376bc94eb1a86391c3de9a81b1aa8a0/install_amplicon_analysis.sh</action>
3512b135ecb0 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 601f7d1e21b25c583cc6e1a563029bab3f226921-dirty
pjbriggs
parents: 28
diff changeset
7 <action type="chmod">
3512b135ecb0 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 601f7d1e21b25c583cc6e1a563029bab3f226921-dirty
pjbriggs
parents: 28
diff changeset
8 <file mode="755">./install_amplicon_analysis.sh</file>
3512b135ecb0 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 601f7d1e21b25c583cc6e1a563029bab3f226921-dirty
pjbriggs
parents: 28
diff changeset
9 </action>
3512b135ecb0 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 601f7d1e21b25c583cc6e1a563029bab3f226921-dirty
pjbriggs
parents: 28
diff changeset
10 <action type="shell_command">
3512b135ecb0 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 601f7d1e21b25c583cc6e1a563029bab3f226921-dirty
pjbriggs
parents: 28
diff changeset
11 ./install_amplicon_analysis.sh $INSTALL_DIR
23
545f23776953 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 993dae6791b28d776b116153e834192435084ef5
pjbriggs
parents: 21
diff changeset
12 </action>
545f23776953 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 993dae6791b28d776b116153e834192435084ef5
pjbriggs
parents: 21
diff changeset
13 <action type="set_environment">
34
3512b135ecb0 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 601f7d1e21b25c583cc6e1a563029bab3f226921-dirty
pjbriggs
parents: 28
diff changeset
14 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/Amplicon_analysis-1.2.3/bin</environment_variable>
23
545f23776953 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 993dae6791b28d776b116153e834192435084ef5
pjbriggs
parents: 21
diff changeset
15 </action>
545f23776953 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 993dae6791b28d776b116153e834192435084ef5
pjbriggs
parents: 21
diff changeset
16 </actions>
545f23776953 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 993dae6791b28d776b116153e834192435084ef5
pjbriggs
parents: 21
diff changeset
17 </install>
545f23776953 planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 993dae6791b28d776b116153e834192435084ef5
pjbriggs
parents: 21
diff changeset
18 </package>
6
45db1f97795c planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit e75f078692e313af3295d2d991fcd8d61270242f
pjbriggs
parents:
diff changeset
19 </tool_dependency>