Mercurial > repos > peterjc > seq_select_by_id
changeset 30:b1e322f39f6c draft
planemo upload for repository https://github.com/peterjc/pico_galaxy/tree/master/tools/seq_select_by_id commit 3ab3d1a9650dec0533344d710ceb027e482d2b10-dirty
| author | peterjc |
|---|---|
| date | Fri, 09 Nov 2018 11:13:47 -0500 |
| parents | c7d51db59082 |
| children | 79178c8f1252 |
| files | tools/seq_select_by_id/seq_select_by_id.py tools/seq_select_by_id/seq_select_by_id.xml |
| diffstat | 2 files changed, 3 insertions(+), 3 deletions(-) [+] |
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--- a/tools/seq_select_by_id/seq_select_by_id.py Fri Sep 15 10:32:03 2017 -0400 +++ b/tools/seq_select_by_id/seq_select_by_id.py Fri Nov 09 11:13:47 2018 -0500 @@ -14,7 +14,7 @@ Cock et al 2009. Biopython: freely available Python tools for computational molecular biology and bioinformatics. Bioinformatics 25(11) 1422-3. -http://dx.doi.org/10.1093/bioinformatics/btp163 pmid:19304878. +https://doi.org/10.1093/bioinformatics/btp163 pmid:19304878. This script is copyright 2011-2017 by Peter Cock, The James Hutton Institute UK. All rights reserved. See accompanying text file for licence details (MIT
--- a/tools/seq_select_by_id/seq_select_by_id.xml Fri Sep 15 10:32:03 2017 -0400 +++ b/tools/seq_select_by_id/seq_select_by_id.xml Fri Nov 09 11:13:47 2018 -0500 @@ -72,14 +72,14 @@ Peter J.A. Cock, Björn A. Grüning, Konrad Paszkiewicz and Leighton Pritchard (2013). Galaxy tools and workflows for sequence analysis with applications in molecular plant pathology. PeerJ 1:e167 -http://dx.doi.org/10.7717/peerj.167 +https://doi.org/10.7717/peerj.167 This tool uses Biopython to read, write and index sequence files, so you may also wish to cite the Biopython application note (and Galaxy too of course): Cock et al (2009). Biopython: freely available Python tools for computational molecular biology and bioinformatics. Bioinformatics 25(11) 1422-3. -http://dx.doi.org/10.1093/bioinformatics/btp163 pmid:19304878. +https://doi.org/10.1093/bioinformatics/btp163 pmid:19304878. This tool is available to install into other Galaxy Instances via the Galaxy Tool Shed at http://toolshed.g2.bx.psu.edu/view/peterjc/seq_select_by_id