# HG changeset patch # User peterjc # Date 1541780027 18000 # Node ID b1e322f39f6c394c7459720685e12b091a308dca # Parent c7d51db590824beeb53537626068a14682a615df planemo upload for repository https://github.com/peterjc/pico_galaxy/tree/master/tools/seq_select_by_id commit 3ab3d1a9650dec0533344d710ceb027e482d2b10-dirty diff -r c7d51db59082 -r b1e322f39f6c tools/seq_select_by_id/seq_select_by_id.py --- a/tools/seq_select_by_id/seq_select_by_id.py Fri Sep 15 10:32:03 2017 -0400 +++ b/tools/seq_select_by_id/seq_select_by_id.py Fri Nov 09 11:13:47 2018 -0500 @@ -14,7 +14,7 @@ Cock et al 2009. Biopython: freely available Python tools for computational molecular biology and bioinformatics. Bioinformatics 25(11) 1422-3. -http://dx.doi.org/10.1093/bioinformatics/btp163 pmid:19304878. +https://doi.org/10.1093/bioinformatics/btp163 pmid:19304878. This script is copyright 2011-2017 by Peter Cock, The James Hutton Institute UK. All rights reserved. See accompanying text file for licence details (MIT diff -r c7d51db59082 -r b1e322f39f6c tools/seq_select_by_id/seq_select_by_id.xml --- a/tools/seq_select_by_id/seq_select_by_id.xml Fri Sep 15 10:32:03 2017 -0400 +++ b/tools/seq_select_by_id/seq_select_by_id.xml Fri Nov 09 11:13:47 2018 -0500 @@ -72,14 +72,14 @@ Peter J.A. Cock, Björn A. Grüning, Konrad Paszkiewicz and Leighton Pritchard (2013). Galaxy tools and workflows for sequence analysis with applications in molecular plant pathology. PeerJ 1:e167 -http://dx.doi.org/10.7717/peerj.167 +https://doi.org/10.7717/peerj.167 This tool uses Biopython to read, write and index sequence files, so you may also wish to cite the Biopython application note (and Galaxy too of course): Cock et al (2009). Biopython: freely available Python tools for computational molecular biology and bioinformatics. Bioinformatics 25(11) 1422-3. -http://dx.doi.org/10.1093/bioinformatics/btp163 pmid:19304878. +https://doi.org/10.1093/bioinformatics/btp163 pmid:19304878. This tool is available to install into other Galaxy Instances via the Galaxy Tool Shed at http://toolshed.g2.bx.psu.edu/view/peterjc/seq_select_by_id