Mercurial > repos > peterjc > ncbi_blast_plus
changeset 34:3952ec621ea9 draft
Uploaded v0.0.22c, fixed a few remaining references to BLAST+ 2.2.27 (e.g. the dependency file)
| author | peterjc |
|---|---|
| date | Thu, 28 Nov 2013 08:56:39 -0500 |
| parents | 5402f9b0d508 |
| children | 1b8a92016045 |
| files | tools/ncbi_blast_plus/ncbi_dustmasker_wrapper.xml tools/ncbi_blast_plus/tool_dependencies.xml |
| diffstat | 2 files changed, 4 insertions(+), 7 deletions(-) [+] |
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--- a/tools/ncbi_blast_plus/ncbi_dustmasker_wrapper.xml Thu Nov 28 08:50:15 2013 -0500 +++ b/tools/ncbi_blast_plus/ncbi_dustmasker_wrapper.xml Thu Nov 28 08:56:39 2013 -0500 @@ -1,14 +1,11 @@ <tool id="ncbi_dustmasker_wrapper" name="NCBI dustmasker" version="0.0.22"> <!-- dustmasker wrapper from Edward Kirton and Nicola Soranzo --> <description>masks low complexity regions</description> - <requirements> - <requirement type="binary">dustmasker</requirement> - <requirement type="package" version="2.2.27">blast+</requirement> - </requirements> - <version_command>dustmasker -version-full</version_command> <macros> + <token name="@BINARY@">dustmasker</token> <import>ncbi_macros.xml</import> </macros> + <expand macro="requirements" /> <command> ## The command is a Cheetah template which allows some Python based syntax. ## Lines starting hash hash are comments. Galaxy will turn newlines into spaces
--- a/tools/ncbi_blast_plus/tool_dependencies.xml Thu Nov 28 08:50:15 2013 -0500 +++ b/tools/ncbi_blast_plus/tool_dependencies.xml Thu Nov 28 08:56:39 2013 -0500 @@ -1,6 +1,6 @@ <?xml version="1.0"?> <tool_dependency> - <package name="blast+" version="2.2.27"> - <repository changeset_revision="eab09bc4d63e" name="package_blast_plus_2_2_27" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu" /> + <package name="blast+" version="2.2.28"> + <repository changeset_revision="5a449da71d08" name="package_blast_plus_2_2_28" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu" /> </package> </tool_dependency>