changeset 24:c07b61d069ac draft

planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit fcaa51faf93ef07835c3bade298a8d24d931ee1b-dirty
author peterjc
date Fri, 09 Nov 2018 11:59:43 -0500
parents a6373b98096a
children c32600ce6c9a
files tools/blastxml_to_top_descr/blastxml_to_top_descr.py
diffstat 1 files changed, 9 insertions(+), 9 deletions(-) [+]
line wrap: on
line diff
--- a/tools/blastxml_to_top_descr/blastxml_to_top_descr.py	Tue Oct 23 06:26:04 2018 -0400
+++ b/tools/blastxml_to_top_descr/blastxml_to_top_descr.py	Fri Nov 09 11:59:43 2018 -0500
@@ -151,15 +151,15 @@
             header = handle.read(100)
         sys.exit("Unable to get root element from XML file %r which starts: %r" % (in_file, header))
 
-    re_default_query_id = re.compile("^Query_\d+$")
-    assert re_default_query_id.match("Query_101")
-    assert not re_default_query_id.match("Query_101a")
-    assert not re_default_query_id.match("MyQuery_101")
-    re_default_subject_id = re.compile("^Subject_\d+$")
-    assert re_default_subject_id.match("Subject_1")
-    assert not re_default_subject_id.match("Subject_")
-    assert not re_default_subject_id.match("Subject_12a")
-    assert not re_default_subject_id.match("TheSubject_1")
+    re_default_query_id = re.compile(r"^Query_\d+$")
+    assert re_default_query_id.match(r"Query_101")
+    assert not re_default_query_id.match(r"Query_101a")
+    assert not re_default_query_id.match(r"MyQuery_101")
+    re_default_subject_id = re.compile(r"^Subject_\d+$")
+    assert re_default_subject_id.match(r"Subject_1")
+    assert not re_default_subject_id.match(r"Subject_")
+    assert not re_default_subject_id.match(r"Subject_12a")
+    assert not re_default_subject_id.match(r"TheSubject_1")
 
     current_query = None
     hit_descrs = []