# HG changeset patch # User peterjc # Date 1541782783 18000 # Node ID c07b61d069ac1162fe05df9cfca9126e4d0a314a # Parent a6373b98096ad301e205b055d14d39c240c7e49b planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blastxml_to_top_descr commit fcaa51faf93ef07835c3bade298a8d24d931ee1b-dirty diff -r a6373b98096a -r c07b61d069ac tools/blastxml_to_top_descr/blastxml_to_top_descr.py --- a/tools/blastxml_to_top_descr/blastxml_to_top_descr.py Tue Oct 23 06:26:04 2018 -0400 +++ b/tools/blastxml_to_top_descr/blastxml_to_top_descr.py Fri Nov 09 11:59:43 2018 -0500 @@ -151,15 +151,15 @@ header = handle.read(100) sys.exit("Unable to get root element from XML file %r which starts: %r" % (in_file, header)) - re_default_query_id = re.compile("^Query_\d+$") - assert re_default_query_id.match("Query_101") - assert not re_default_query_id.match("Query_101a") - assert not re_default_query_id.match("MyQuery_101") - re_default_subject_id = re.compile("^Subject_\d+$") - assert re_default_subject_id.match("Subject_1") - assert not re_default_subject_id.match("Subject_") - assert not re_default_subject_id.match("Subject_12a") - assert not re_default_subject_id.match("TheSubject_1") + re_default_query_id = re.compile(r"^Query_\d+$") + assert re_default_query_id.match(r"Query_101") + assert not re_default_query_id.match(r"Query_101a") + assert not re_default_query_id.match(r"MyQuery_101") + re_default_subject_id = re.compile(r"^Subject_\d+$") + assert re_default_subject_id.match(r"Subject_1") + assert not re_default_subject_id.match(r"Subject_") + assert not re_default_subject_id.match(r"Subject_12a") + assert not re_default_subject_id.match(r"TheSubject_1") current_query = None hit_descrs = []