changeset 5:5057cf5e1832 draft

Uploaded
author pavanvidem
date Tue, 26 May 2015 08:46:20 -0400
parents 9e93f1274d6f
children 237c8c665b8d
files tool_dependencies.xml
diffstat 1 files changed, 3 insertions(+), 6 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Tue May 26 08:15:43 2015 -0400
+++ b/tool_dependencies.xml	Tue May 26 08:46:20 2015 -0400
@@ -1,8 +1,5 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <package name="R" version="3.1.0">
-        <repository changeset_revision="cfa09c247b6e" name="package_r_3_1_0" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-    </package>
     <package name="deseq2" version="1.6.1">
         <repository changeset_revision="5beee6b62be7" name="package_deseq2_1_6_1" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
@@ -10,9 +7,9 @@
         <install version="1.0">
             <actions>
                 <action type="setup_r_environment">
-                    <repository changeset_revision="cfa09c247b6e" name="package_r_3_1_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
-                        <package name="R" version="3.1.0" />
-                    </repository>
+                        <repository changeset_revision="5beee6b62be7" name="package_deseq2_1_6_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                            <package name="deseq2" version="1.6.1" />
+                        </repository>
                         <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/limma_3.18.9.tar.gz</package>
                         <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/Biostrings_2.30.1.tar.gz</package>
                         <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/amap_0.8-7.tar.gz</package>