Mercurial > repos > p.lucas > taxid_genusexpand_taxid2acc
changeset 5:b53e594a8042 draft
Uploaded 13 03 23 correct wrapper file to add .py to the script
| author | p.lucas |
|---|---|
| date | Mon, 13 Mar 2023 13:23:31 +0000 |
| parents | 9aed02bbc85c |
| children | 81acd8138218 |
| files | TAXID_genusexpand_taxid2acc.xml |
| diffstat | 1 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/TAXID_genusexpand_taxid2acc.xml Mon Mar 13 13:22:36 2023 +0000 +++ b/TAXID_genusexpand_taxid2acc.xml Mon Mar 13 13:23:31 2023 +0000 @@ -1,4 +1,4 @@ -<tool id="TAXID_genusexpand_taxid2acc" name="Get acc number for complete genome after MEGABLAST_TAB_select_acc_under_taxids" version="1"> +<tool id="TAXID_genusexpand_taxid2acc" name="Get acc number for complete genome after MEGABLAST_TAB_select_acc_under_taxids" version="1.1"> <description> From a taxid and acc number file of results (output of MEGABLAST_TAB_select_acc_under_taxids.py) provide 1 file: @@ -10,7 +10,7 @@ <requirement type="package" version="0.3.1">ncbi-genome-download</requirement> </requirements> <command detect_errors="exit_code"><![CDATA[ - python '$__tool_directory__/TAXID_genusexpand_taxid2acc' -i ${input} -o ${output} + python '$__tool_directory__/TAXID_genusexpand_taxid2acc.py' -i ${input} -o ${output} ]]></command> <inputs> <param name="input" format="tsv" type="data" label="Select tsv file with list of taxid and accession number." help="tsv output of MEGABLAST_TAB_select_acc_under_taxids.py (One taxid acc nbr per line)"/>